Articles

Cheminformatics, QSAR, RDF, Chemical databases, Web services

2017

  • Karcher, S.; Willighagen, E. L.; Rumble, J.; Ehrhart, F.; Evelo, C. T.; Fritts, M.; Gaheen, S.; Harper, S. L.; Hoover, M. D.; Jeliazkova, N.; et al. Integration among databases and data sets to support productive nanotechnology: Challenges and recommendations. NanoImpact 2017 DOI:10.1016/j.impact.2017.11.002.
  • Nymark, P.; Rieswijk, L.; Ehrhart, F.; Jeliazkova, N.; Tsiliki, G.; Sarimveis, H.; Evelo, C. T.; Hongisto, V.; Kohonen, P.; Willighagen, E.; et al. A data fusion pipeline for generating and enriching Adverse Outcome Pathway descriptions. Toxicol. Sci. 2017 DOI: 10.1093/toxsci/kfx252.
  • Puzyn, T.; Jeliazkova, N.; Sarimveis, H.; Marchese Robinson, R. L.; Lobaskin, V.; Rallo, R.; Richarz, A.-N.; Gajewicz, A.; Papadopulos, M. G.; Hastings, J.; et al. Perspectives from the NanoSafety Modelling Cluster on the validation criteria for (Q)SAR models used in nanotechnology. Food Chem. Toxicol. 2017 , DOI:10.1016/j.fct.2017.09.037.
  • Willighagen, E. L.; Mayfield, J. W.; Alvarsson, J.; Berg, A.; Carlsson, L.; Jeliazkova, N.; Kuhn, S.; Pluskal, T.; Rojas-Cherto, M.; Spjuth, O.; et al. The Chemistry Development Kit (CDK) v2.0: atom typing, depiction, molecular formulas, and substructure searching. J. Cheminform. 2017, 9, 33 DOI: 10.1186/s13321-017-0220-4.
  • J. Sun, N. Jeliazkova, V. Chupakin, J.-F. Golib-Dzib, O. Engkvist, L. Carlsson, J. Wegner, H. Ceulemans, I. Georgiev, V. Jeliazkov, N. Kochev, T. J. Ashby, and H. Chen, ExCAPE-DB: an integrated large scale dataset facilitating Big Data analysis in chemogenomics, J. Cheminform., vol. 9, no. 1, p. 17, Mar. 2017. 10.1186/s13321-017-0203-5
  • N. Jeliazkova and V. Jeliazkov, Making Big Data Available: Integrating Technologies for Toxicology Applications, in Big Data in Predictive Toxicology, D. Neagu and A. Richarz, Eds. RSC Publishing, 1 edition 2017 .
  • N. Kochev, I. Tsakovska, and N. Jeliazkova, Cheminformatics representation of chemical structures - a milestone for successful big data modelling, in Big Data in Predictive Toxicology, D. Neagu and A. Richarz, Eds. RSC Publishing, 1 edition 2017.

 

2016

2015

2014

2013

2012

2011

2010

  • Jeliazkova N., Jaworska J., Worth A. (2010) Chapter 17. Open Source Tools for Read-Across and Category Formation, In M. Cronin, & Madden J. (Eds.), In Silico Toxicology : Principles and Applications (pp. 408-445). Cambridge, UK: RSC Publishing
  • B. Hardy, N. Douglas, C. Helma, M. Rautenberg, N. Jeliazkova, V. Jeliazkov, I. Nikolova, R. Benigni, O. Tcheremenskaia, S. Kramer, T. Girschick, F. Buchwald, J. Wicker, A. Karwath, M. Gütlein, A. Maunz, H. Sarimveis, G. Melagraki, A. Afantitis, P. Sopasakis, D. Gallagher, V. Poroikov, D. Filimonov, A. Zakharov, A. Lagunin, T. Gloriozova, S. Novikov, N. Skvortsova, D. Druzhilovsky , S. Chawla, I. Ghosh, S. Ray, H. Patel, S. Escher, Collaborative Development of Predictive Toxicology Applications, Journal of Cheminformatics 2010, 2:7doi:10.1186/1758-2946-2-7.

2009

2008

2007

2005

2004 and earlier

Data mining, Pattern Recognition, Generalized Nets, Neural Networks

Internet, Networking

  • N. Jeliazkova, L. Iliev, V. Jeliazkov, PerfsonarUI – a Standalone Graphical User Interface for Querying perfSONAR Services, IEEE 2006 John Vincent Atanasoff International Symposium on Modern Computing, Sofia, Oct 3-5 2006
  • Egorov A., Nikolova N., Load balancing : A case study, in Proceedings of the 10th International Conference "Systems for Automation of Engineering and Research", (SAER '96), September 27-29, 1996, St. Konstantin resort, Varna, Bulgaria

Presentations

Cheminformatics, QSAR, Chemical Similarity, Resource Description Framework

2012

2011

2010

2009

2007

2006

2005

  • Nina Jeliazkova Chemical similarity ECB Workshop on Chemical Similarity and TTC approaches ,7-8 Nov 2005

2004

Network Performance Measurement, Representational State Transfer (REST) architecture

Book chapters

  • Willighagen E, Affentranger R, Grafström R, Hardy B, Jeliazkova N, Spjuth O et al. Chapter 2. Interactive predictive toxicology with Bioclipse and OpenTox. In: Harland L, Forster M, eds. Open Source Software in Life Science Research: Practical Solutions to Common Challenges in the Pharmaceutical Industry and Beyond. Woodhead Publishing Series in Biomedicine; 2012:35–61.
  • Boyanov K, Tourlakov Ch., Simeonov A., Boyanow L., Yanev S., Nikolova N., Boyadjiev Y., Genchev G., "Computer Networks. Internet", Sofia, 1998, in Bulgarian
  • Boyanov K, Tourlakov Ch., Simeonov A., Boyanow L., Yanev S., Nikolova N., Boyadjiev Y., Genchev G., "Internetworking. Network Principles, Protocols and Administration", Sofia, 1996, in English.